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7 papers · 1 filter
The Mystery of Two Straight Lines in Bacterial Genome Statistics. Release 2007
A. N. Gorban, A. Yu. Zinovyev
In special coordinates (codon position--specific nucleotide frequencies) bacterial genomes form two straight lines in 9-dimensional space: one line for eubacterial genomes, another…
Universal Critical Behavior of Noisy Coupled Oscillators
Thomas Risler, Jacques Prost, Frank Julicher
We study the universal thermodynamic properties of systems consisting of many coupled oscillators operating in the vicinity of a homogeneous oscillating instability. In the thermod…
GATE : a simulation toolkit for PET and SPECT
S. Jan, G. Santin, D. Strul +50
Monte Carlo simulation is an essential tool in emission tomography that can assist in the design of new medical imaging devices, the optimization of acquisition protocols, and the…
Generic theory of active polar gels: a paradigm for cytoskeletal dynamics
Karsten Kruse, Jean-Francois Joanny, Frank Julicher +2
We develop a general theory for active viscoelastic materials made of polar filaments. This theory is motivated by the dynamics of the cytoskeleton. The continuous consumption of a…
Elastic principal manifolds and their practical applications
A. N. Gorban, A. Yu. Zinovyev
Principal manifolds serve as useful tool for many practical applications. These manifolds are defined as lines or surfaces passing through "the middle" of data distribution. We pro…
Fast DNA translocation through a solid-state nanopore
Arnold J. Storm, Cornelis Storm, Jianghua Chen +3
We report translocation experiments on double-strand DNA through a silicon oxide nanopore. Samples containing DNA fragments with seven different lengths between 2000 to 96000 basep…