output
20162026
most citedMembraneless organelles formed by liquid-liquid phase separation increase bacterial fitness

142 citations

23 papers

cs.LG2026

Multi-Feature Riemannian Hypergraph for Online Test-Time Adaptation of Motor Imagery Brain-Computer Interface

Siqi Li, Zhi Li, Tong Liu +5

In clinical motor imagery brain-computer interface (MI-BCI) decoding, cross-day transferability and online operation remain two critical challenges. Hypergraphs can improve transfe…

eess.IV2026

Deep Learning-Based Airway Segmentation in Systemic Lupus Erythematosus Patients with Interstitial Lung Disease (SLE-ILD): A Comparative High-Resolution CT Analysis

Sirong Piao, Ying Ming, Ruijie Zhao +11

To characterize lobar and segmental airway volume differences between systemic lupus erythematosus (SLE) patients with interstitial lung disease (ILD) and those without ILD (non-IL…

cs.CV2025

Digital Contrast CT Pulmonary Angiography Synthesis from Non-contrast CT for Pulmonary Vascular Disease

Ying Ming, Yue Lin, Longfei Zhao +6

Computed Tomography Pulmonary Angiography (CTPA) is the reference standard for diagnosing pulmonary vascular diseases such as Pulmonary Embolism (PE) and Chronic Thromboembolic Pul…

q-bio.GN2025★ 1 cited

SiCmiR Atlas: Single-Cell miRNA Landscapes Reveals Hub-miRNA and Network Signatures in Human Cancers

Xiao-Xuan Cai, Jing-Shan Liao, Jia-Jun Ma +10

microRNA are pivotal post-transcriptional regulators whose single-cell behavior has remained largely inaccessible owing to technical barriers in single-cell small-RNA profiling. We…

eess.IV2025

Bronchovascular Tree-Guided Weakly Supervised Learning Method for Pulmonary Segment Segmentation

Ruijie Zhao, Zuopeng Tan, Xiao Xue +10

Pulmonary segment segmentation is crucial for cancer localization and surgical planning. However, the pixel-wise annotation of pulmonary segments is laborious, as the boundaries be…

cs.CL2025★ 16 cited

Streamlining evidence based clinical recommendations with large language models

Dubai Li, Nan Jiang, Kangping Huang +13

Clinical evidence underpins informed healthcare decisions, yet integrating it into real-time practice remains challenging due to intensive workloads, complex procedures, and time c…

eess.IV2025★ 1 cited

High Accuracy Pulmonary Vessel Segmentation for Contrast and Non-contrast CT Images and Clinical Evaluation

Ying Ming, Shaoze Luo, Longfei Zhao +4

Accurate segmentation of pulmonary vessels plays a very critical role in diagnosing and assessing various lung diseases. Currently, many automated algorithms are primarily targeted…

cs.CC2025★ 1 cited

Compilation and Fast Model Counting beyond CNF

Alexis de Colnet, Stefan Szeider, Tianwei Zhang

Circuits in deterministic decomposable negation normal form (d-DNNF) are representations of Boolean functions that enable linear-time model counting. This paper strengthens our the…

cs.CV2024★ 5 cited

AttriPrompter: Auto-Prompting with Attribute Semantics for Zero-shot Nuclei Detection via Visual-Language Pre-trained Models

Yongjian Wu, Yang Zhou, Jiya Saiyin +4

Large-scale visual-language pre-trained models (VLPMs) have demonstrated exceptional performance in downstream object detection through text prompts for natural scenes. However, th…

cs.AI2024★ 4 cited

Methodology and Real-World Applications of Dynamic Uncertain Causality Graph for Clinical Diagnosis with Explainability and Invariance

Zhan Zhang, Qin Zhang, Yang Jiao +18

AI-aided clinical diagnosis is desired in medical care. Existing deep learning models lack explainability and mainly focus on image analysis. The recently developed Dynamic Uncerta…

physics.bio-ph2023★ 1 cited

Transmission infrared micro-spectroscopic study of individual human hair

Chen Li, Yuhan Du, Haonan Chen +5

Understanding the optical transmission property of human hair, especially in the infrared regime, is vital in physical, clinical, and biomedical research. However, the majority of…

eess.IV2023★ 6 cited

Deep Anatomical Federated Network (Dafne): An open client-server framework for the continuous, collaborative improvement of deep learning-based medical image segmentation

Francesco Santini, Jakob Wasserthal, Abramo Agosti +11

Purpose: To present and evaluate Dafne (deep anatomical federated network), a freely available decentralized, collaborative deep learning system for the semantic segmentation of ra…

cs.CV2022★ 4 cited

Lesion Localization in OCT by Semi-Supervised Object Detection

Yue Wu, Yang Zhou, Jianchun Zhao +4

Over 300 million people worldwide are affected by various retinal diseases. By noninvasive Optical Coherence Tomography (OCT) scans, a number of abnormal structural changes in the…

cs.CV2021★ 51 cited

Multi-Modal Multi-Instance Learning for Retinal Disease Recognition

Xirong Li, Yang Zhou, Jie Wang +5

This paper attacks an emerging challenge of multi-modal retinal disease recognition. Given a multi-modal case consisting of a color fundus photo (CFP) and an array of OCT B-scan im…

q-bio.BM2021★ 142 cited

Membraneless organelles formed by liquid-liquid phase separation increase bacterial fitness

Xin Jin, Ji-Eun Lee, Charley Schaefer +10

Liquid-liquid phase separation is emerging as a crucial phenomenon in several fundamental cell processes. A range of eukaryotic systems exhibit liquid condensates. However, their f…

eess.IV2021

SS-CADA: A Semi-Supervised Cross-Anatomy Domain Adaptation for Coronary Artery Segmentation

Jingyang Zhang, Ran Gu, Guotai Wang +2

The segmentation of coronary arteries by convolutional neural network is promising yet requires a large amount of labor-intensive manual annotations. Transferring knowledge from re…

stat.AP2020★ 37 cited

OutbreakFlow: Model-based Bayesian inference of disease outbreak dynamics with invertible neural networks and its application to the COVID-19 pandemics in Germany

Stefan T. Radev, Frederik Graw, Simiao Chen +4

Mathematical models in epidemiology are an indispensable tool to determine the dynamics and important characteristics of infectious diseases. Apart from their scientific merit, the…

cs.CV2020★ 45 cited

Weakly Supervised Vessel Segmentation in X-ray Angiograms by Self-Paced Learning from Noisy Labels with Suggestive Annotation

Jingyang Zhang, Guotai Wang, Hongzhi Xie +4

The segmentation of coronary arteries in X-ray angiograms by convolutional neural networks (CNNs) is promising yet limited by the requirement of precisely annotating all pixels in…

eess.IV2020★ 54 cited

SuperDTI: Ultrafast diffusion tensor imaging and fiber tractography with deep learning

Hongyu Li, Zifei Liang, Chaoyi Zhang +9

Purpose: To propose a deep learning-based reconstruction framework for ultrafast and robust diffusion tensor imaging and fiber tractography. Methods: We propose SuperDTI to learn t…

eess.IV2020★ 51 cited

Encoding Metal Mask Projection for Metal Artifact Reduction in Computed Tomography

Yuanyuan Lyu, Wei-An Lin, Haofu Liao +2

Metal artifact reduction (MAR) in computed tomography (CT) is a notoriously challenging task because the artifacts are structured and non-local in the image domain. However, they a…

cs.CV2019★ 3 cited

Learn to Segment Retinal Lesions and Beyond

Qijie Wei, Xirong Li, Weihong Yu +8

Towards automated retinal screening, this paper makes an endeavor to simultaneously achieve pixel-level retinal lesion segmentation and image-level disease classification. Such a m…

cs.CV2018★ 11 cited

Joint Learning for Pulmonary Nodule Segmentation, Attributes and Malignancy Prediction

Botong Wu, Zhen Zhou, Jianwei Wang +1

Refer to the literature of lung nodule classification, many studies adopt Convolutional Neural Networks (CNN) to directly predict the malignancy of lung nodules with original thora…

cs.CL2016★ 42 cited

LightRNN: Memory and Computation-Efficient Recurrent Neural Networks

Xiang Li, Tao Qin, Jian Yang +1

Recurrent neural networks (RNNs) have achieved state-of-the-art performances in many natural language processing tasks, such as language modeling and machine translation. However,…