output
20122026
most citedPersistence-driven durotaxis: Generic, directed motility in rigidity gradients

81 citations

21 papers

physics.chem-ph2026★ 1 cited

Reassessing carotenoid photophysics: shedding light on dark states

Roxanne Bercy, Viola Dmello, Andrew Gall +5

Carotenoid molecules are critical in photosynthesis, performing functions at the heart of both light-harvesting and photoprotection. As both these processes involve excitation ener…

stat.ML2025

Optimal Stopping in Latent Diffusion Models

Yu-Han Wu, Quentin Berthet, Gérard Biau +3

We identify and analyze a surprising phenomenon of Latent Diffusion Models (LDMs) where the final steps of the diffusion can degrade sample quality. In contrast to conventional arg…

stat.ML2025

When Pattern-by-Pattern Works: Theoretical and Empirical Insights for Logistic Models with Missing Values

Christophe Muller, Erwan Scornet, Julie Josse

Predicting with missing inputs challenges even parametric models, as parameter estimation alone is insufficient for prediction on incomplete data. While several works study predict…

math.ST2024

Stable network inference in high-dimensional graphical model using single-linkage

Emilie Devijver, Rémi Molinier, Mélina Gallopin

Stability, akin to reproducibility, is crucial in statistical analysis. This paper examines the stability of sparse network inference in high-dimensional graphical models, where se…

q-bio.SC2023★ 40 cited

Phosphatidylserine transport in cell life and death

Alenka {Č}opi{č}, Thibaud Dieudonné, Guillaume Lenoir

Phosphatidylserine (PS) is a negatively-charged glycerophospholipid found mainly in the plasma membrane (PM) and in the late secretory/endocytic compartments, where it regulates ce…

stat.ML2022★ 2 cited

Dealing with Unknown Variances in Best-Arm Identification

Marc Jourdan, Rémy Degenne, Emilie Kaufmann

The problem of identifying the best arm among a collection of items having Gaussian rewards distribution is well understood when the variances are known. Despite its practical rele…

stat.ML2022★ 1 cited

Risk-aware linear bandits with convex loss

Patrick Saux, Odalric-Ambrym Maillard

In decision-making problems such as the multi-armed bandit, an agent learns sequentially by optimizing a certain feedback. While the mean reward criterion has been extensively stud…

q-bio.QM2022★ 4 cited

Integrative omics framework for characterization of coral reef ecosystems from the Tara Pacific expedition

Caroline Belser, Julie Poulain, Karine Labadie +33

Coral reef science is a fast-growing field propelled by the need to better understand coral health and resilience to devise strategies to slow reef loss resulting from environmenta…

cond-mat.soft2022★ 8 cited

Rheology and structure of a suspension of deformable particles in plane Poiseuille flow

Vassanti Audemar, Thomas Podgorski, Gwennou Coupier

We present an experimental study of the rheology and structure of a confined suspension of deformable particles flowing in a quasi-two-dimensional Poiseuille flow. Thanks to a prec…

physics.bio-ph2022★ 15 cited

Direct measurement of the aerotactic response in a bacterial suspension

J. Bouvard, C. Douarche, P. Mergaert +2

Aerotaxis is the ability of motile cells to navigate toward oxygen. A key question is the dependence of the aerotactic velocity with the local oxygen concentration c. Here we combi…

stat.AP2021

A comprehensive guideline for regularization-path variable selection in high-dimensional Gaussian linear regression

Perrine Lacroix, Mélina Gallopin, Marie-Laure Martin

This paper provides a comprehensive comparison of complete regularization-path-based variable selection procedures in high-dimensional Gaussian linear regression. Our simulation st…

cond-mat.soft2021★ 1 cited

Self-Assembly, Interfacial Properties, Interactions with Macromolecules and Molecular Modelling and Simulation of Microbial Bio-based Amphiphiles (Biosurfactants). A Tutorial Review

Niki Baccile, Chloé Seyrig, Alexandre Poirier +3

Chemical surfactants are omnipresent in consumers' products but they suffer from environmental concerns. For this reason, complete replacement of petrochemical surfactants by biosu…

physics.bio-ph2020★ 3 cited

Are bacteria claustrophobic? The problem of micrometric spatial confinement for the culture of micro-organisms

Céline Molinaro, Violette Da Cunha, Aurore Gorlas +5

Culturing cells confined in microscale geometries has been reported in many studies this last decade, in particular following the development of microfluidic-based applications and…

physics.bio-ph2019★ 10 cited

Evolving roles and dynamics for catch and slip bonds during adhesion cluster maturation

Elizaveta A. Novikova, Cornelis Storm

Focal adhesions are the loci of cellular adhesion to the extracellular matrix. At these sites, various integrins forge connections between the intracellular cytoskeleton and the ou…

q-bio.OT2019★ 10 cited

Morphogenesis Software based on Epigenetic Code Concept

N. Bessonov, O. Butuzova, A. Minarsky +4

The process of morphogenesis is an evolution of the shape of an organism together with the differentiation of its parts. This process encompasses numerous biological processes rang…

math.CA2019★ 2 cited

Bounds on Autocorrelation Coefficients of Rudin-Shapiro Polynomials

J. -P. Allouche, S. Choi, A. Denise +2

We study the autocorrelation coefficients of the Rudin-Shapiro polynomials, proving in particular that their maximum on the interval is bounded from below by $C_1 2^{αn}…

physics.app-ph2018★ 1 cited

Charge-independent mass spectrometry of single virus capsids above 100MDa with nanomechanical resonators

Sergio Dominguez-Medina, Shawn Fostner, Martial Defoort +10

Most technologies, including conventional mass spectrometry, struggle to measure the mass of particles in the MDa to GDa range. Although this mass range appears optimal for nanomec…

physics.bio-ph2018★ 13 cited

Slowdown of the surface diffusion during early stages of bacterial colonization

Thomas Vourc'h, Julien Léopoldès, Annick Méjean +3

We study the surface diffusion of the model cyanobacterium Synechocystis sp. PCC during the incipient stages of cell contact with a glass surface in the dilute regime. We ob…

cs.IT2017★ 32 cited

Bayesian Compressive Sensing Approaches for Direction of Arrival Estimation with Mutual Coupling Effects

Matthew Hawes, Lyudmila Mihaylova, François Septier +1

The problem of estimating the dynamic direction of arrival of far field signals impinging on a uniform linear array, with mutual coupling effects, is addressed. This work proposes…

physics.bio-ph2015★ 81 cited

Persistence-driven durotaxis: Generic, directed motility in rigidity gradients

Elizaveta A. Novikova, Matthew Raab, Dennis E. Discher +1

Cells move differently on substrates with different elasticities. In particular, the persistence time of their motion is higher on stiffer substrates. We show that this behavior wi…

q-bio.MN2012★ 4 cited

Basic, simple and extendable kinetic model of protein synthesis

Alexander N. Gorban, Annick Harel-Bellan, Nadya Morozova +1

Protein synthesis is one of the most fundamental biological processes, which consumes a significant amount of cellular resources. Despite existence of multiple mathematical models…