205 citations
- Ghent UniversityBE9 papers
- Barcelona Supercomputing CenterES4 papers
- Universitat Politècnica de CatalunyaES4 papers
- University of AmsterdamNL4 papers
- University of ManchesterGB4 papers
- Center for Advanced Studies Research and Development in SardiniaIT3 papers
- KU LeuvenBE3 papers
- University of FreiburgDE3 papers
- Harvard UniversityUS2 papers
- Oak Ridge National LaboratoryUS2 papers
- SIB Swiss Institute of BioinformaticsCH2 papers
- Universidad Politécnica de MadridES2 papers
14 papers
WorkflowHub: a registry for computational workflows
Ove Johan Ragnar Gustafsson, Sean R. Wilkinson, Finn Bacall +12
The rising popularity of computational workflows is driven by the need for repetitive and scalable data processing, sharing of processing know-how, and transparent methods. As both…
Learning and teaching biological data science in the Bioconductor community
Jenny Drnevich, Frederick J. Tan, Fabricio Almeida-Silva +15
Modern biological research is increasingly data-intensive, leading to a growing demand for effective training in biological data science. In this article, we provide an overview of…
Recording provenance of workflow runs with RO-Crate
Simone Leo, Michael R. Crusoe, Laura Rodríguez-Navas +15
Recording the provenance of scientific computation results is key to the support of traceability, reproducibility and quality assessment of data products. Several data models have…
The out-of-sample : estimation and inference
Stijn Hawinkel, Willem Waegeman, Steven Maere
Out-of-sample prediction is the acid test of predictive models, yet an independent test dataset is often not available for assessment of the prediction error. For this reason, out-…
A Community Roadmap for Scientific Workflows Research and Development
Rafael Ferreira da Silva, Henri Casanova, Kyle Chard +26
The landscape of workflow systems for scientific applications is notoriously convoluted with hundreds of seemingly equivalent workflow systems, many isolated research claims, and a…
Packaging research artefacts with RO-Crate
Stian Soiland-Reyes, Peter Sefton, Mercè Crosas +13
An increasing number of researchers support reproducibility by including pointers to and descriptions of datasets, software and methods in their publications. However, scientific a…