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q-bio.BM2008★ 76 cited
Discrete breathers in protein structures
Francesco Piazza, Yves-Henri Sanejouand
Recently, using a numerical surface cooling approach, we have shown that highly energetic discrete breathers (DB) can form in the stiffest parts of nonlinear network models of larg…
q-bio.BM2007★ 5 cited
Random RNA under tension
Francois David, Christian Hagendorf, Kay Joerg Wiese
The Laessig-Wiese (LW) field theory for the freezing transition of random RNA secondary structures is generalized to the situation of an external force. We find a second-order phas…
q-bio.BM2005★ 96 cited
Functional modes of proteins are among the most robust ones
Samuel Nicolay, Yves-Henri Sanejouand
It is shown that a small subset of modes which are likely to be involved in protein functional motions of large amplitude can be determined by retaining the most robust normal mode…