papers
Publications (3)
physics.chem-ph2023
Approximating First Hitting Point Distribution in Milestoning for Rare Event Kinetics
Ru Wang, Hao Wang, Wenjian Liu +1
Milestoning is an efficient method for rare event kinetics calculation using short trajectory parallelization. Mean first passage time (MFPT) is the key kinetic output of Milestoni…
physics.bio-ph2020
Computer Simulations of a Heterogeneous Membrane with Enhanced Sampling Techniques
Yevhen K. Cherniavskyi, Arman Fathizadeh, Ron Elber +1
Computational determination of the equilibrium state of heterogeneous phospholipid mem-branes is a significant challenge. We wish to explore the rich phase diagram of these multi-c…
math-ph2015
A mathematical framework for exact milestoning
David Aristoff, Juan M. Bello-Rivas, Ron Elber
We give a mathematical framework for Exact Milestoning, a recently introduced algorithm for mapping a continuous time stochastic process into a Markov chain or semi-Markov process…