papers
Publications (3)
cs.LG2023
Improving Small Molecule Generation using Mutual Information Machine
Danny Reidenbach, Micha Livne, Rajesh K. Ilango +2
We address the task of controlled generation of small molecules, which entails finding novel molecules with desired properties under certain constraints (e.g., similarity to a refe…
cs.LG2025
BioNeMo Framework: a modular, high-performance library for AI model development in drug discovery
Peter St. John, Dejun Lin, Polina Binder +89
Artificial Intelligence models encoding biology and chemistry are opening new routes to high-throughput and high-quality in-silico drug development. However, their training increas…
q-bio.GN2020
Genome Variant Calling with a Deep Averaging Network
Nikolai Yakovenko, Avantika Lal, Johnny Israeli +1
Variant calling, the problem of estimating whether a position in a DNA sequence differs from a reference sequence, given noisy, redundant, overlapping short sequences that cover th…