Publications (5)
Speeding up SOR Solvers for Constraint-based GUIs with a Warm-Start Strategy
Noreen Jamil, Johannes Müller, Christof Lutteroth +1
Many computer programs have graphical user interfaces (GUIs), which need good layout to make efficient use of the available screen real estate. Most GUIs do not have a fixed layout…
Detection of construction biases in biological databases: the case of miRBase
Guilherme Bicalho Saturnino, Caio Padoan de Sá Godinho, Denise Fagundes-Lima +2
Biological databases can be analysed as a complex network which may reveal some its underlying biological mechanisms. Frequently, such databases are identified as scale-free networ…
Kaczmarz Algorithm with Soft Constraints for User Interface Layout
Noreen Jamil, Deanna Needell, Johannes Muller +2
The Kaczmarz method is an iterative method for solving large systems of equations that projects iterates orthogonally onto the solution space of each equation. In contrast to direc…
Sharp DNA denaturation in a helicoidal mesoscopic model
Mateus Rodrigues Leal, Gerald Weber
The Peyrard-Bishop DNA model describes the molecular interactions with simple potentials which allow efficient calculations of melting temperatures. However, it is based on a Hamil…
CG-content log-ratio distributions of Caenorhabditis elegans and Drosophila melanogaster mirtrons
Denise Fagundes-Lima, Gerald Weber
Mirtrons are a special type of pre-miRNA which originate from intronic regions and are spliced directly from the transcript instead of being processed by Drosha. The splicing mecha…